STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hyaDGlycosyl transferase, family 2. (307 aa)    
Predicted Functional Partners:
Lcin_0823
Hypothetical protein.
       0.840
mshA
Glycosyltransferase, lipopolysaccharide biosynthesis protein.
 
 
 0.777
wbbL
Putative glycosyl transferase.
 
 
 0.705
wcfH_2
Deacetylase.
  
 
  0.660
capM2
CapM protein, capsular polysaccharide biosynthesis.
 
 
 0.601
Lcin_2596
3-beta hydroxysteroid dehydrogenase/isomerase.
 
 
 0.563
galE
UDP-glucose 4-epimerase.
 
 
 0.534
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.520
Lcin_0826
Hypothetical protein.
       0.515
rkpA
Type I polyketide synthase WcbR.
  
 0.500
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.