STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_0892ATPase MoxR. (333 aa)    
Predicted Functional Partners:
Lcin_0895
Hypothetical protein.
 
 
 0.967
Lcin_0893
Hypothetical protein.
 
  
 0.964
Lcin_0894
Hypothetical protein.
 
 
 0.945
Lcin_0896
Hypothetical protein.
 
     0.942
Lcin_0898
KQDN repeat-containing protein.
 
  
 0.927
Lcin_0897
TPR repeat containing protein.
 
     0.918
Lcin_1013
Serine carboxypeptidase.
    
 0.627
fleN
Flagellar synthesis regulator.
     
  0.549
parA_1
Chromosome partitioning protein ParA.
    
 0.518
parA_2
Sporulation initiation inhibitor protein Soj.
    
 0.518
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.