Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bprV_2Serine protease, subtilase family. (570 aa)    
Predicted Functional Partners:
bprV_1
Serine protease, subtilase family.
 
  
 
0.781
bprV_3
Serine protease; Belongs to the peptidase S8 family.
  
 
0.754
Lcin_0907
Hypothetical protein.
       0.615
Lcin_0801
Aminopeptidase.
  
  
 0.571
Lcin_1003
Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat).
  
 
 0.566
Lcin_1793
NHL repeat protein.
    
 0.495
Lcin_1005
Glycosyl hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
  
 0.419
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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