Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Lcin_0977Protein containing a histone methylation DOT1 motif protein. (238 aa)    
Predicted Functional Partners:
himD
Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
       0.700
Lcin_1890
Hypothetical protein.
  
     0.695
Lcin_2314
Zinc-iron permease (ZIP) family metal cation transporter.
 
     0.675
Lcin_2478
Hypothetical protein.
  
     0.647
Lcin_3241
Hypothetical protein.
  
     0.634
Lcin_2980
Tubulin-tyrosine ligase family protein.
  
     0.627
Lcin_1327
Enhanced entry protein EnhA.
  
     0.624
IvrA
Hypothetical protein.
  
     0.613
Lcin_2723
Protein LvrA.
  
     0.607
dotA_2
Hypothetical protein.
  
     0.594
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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