Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lcin_1522 | Lcin_1523 | Lcin_1522 | Lcin_1523 | Putative conjugative transfer protein TraF. | Putative conjugative transfer protein TrbB. | 0.792 |
Lcin_1522 | Lcin_3328 | Lcin_1522 | Lcin_3328 | Putative conjugative transfer protein TraF. | Conjugative transfer protein. | 0.778 |
Lcin_1522 | Lcin_3330 | Lcin_1522 | Lcin_3330 | Putative conjugative transfer protein TraF. | Conjugative transfer protein TraN. | 0.774 |
Lcin_1522 | ahpC_1 | Lcin_1522 | Lcin_0991 | Putative conjugative transfer protein TraF. | Alkyl hydroperoxide reductase. | 0.771 |
Lcin_1522 | trxB | Lcin_1522 | Lcin_2857 | Putative conjugative transfer protein TraF. | Thioredoxin reductase. | 0.694 |
Lcin_1523 | Lcin_1522 | Lcin_1523 | Lcin_1522 | Putative conjugative transfer protein TrbB. | Putative conjugative transfer protein TraF. | 0.792 |
Lcin_1523 | ahpC_1 | Lcin_1523 | Lcin_0991 | Putative conjugative transfer protein TrbB. | Alkyl hydroperoxide reductase. | 0.769 |
Lcin_1523 | trxB | Lcin_1523 | Lcin_2857 | Putative conjugative transfer protein TrbB. | Thioredoxin reductase. | 0.684 |
Lcin_3328 | Lcin_1522 | Lcin_3328 | Lcin_1522 | Conjugative transfer protein. | Putative conjugative transfer protein TraF. | 0.778 |
Lcin_3328 | Lcin_3329 | Lcin_3328 | Lcin_3329 | Conjugative transfer protein. | Conjugative transfer protein TraF. | 0.947 |
Lcin_3328 | Lcin_3330 | Lcin_3328 | Lcin_3330 | Conjugative transfer protein. | Conjugative transfer protein TraN. | 0.949 |
Lcin_3328 | ahpC_1 | Lcin_3328 | Lcin_0991 | Conjugative transfer protein. | Alkyl hydroperoxide reductase. | 0.769 |
Lcin_3328 | trxB | Lcin_3328 | Lcin_2857 | Conjugative transfer protein. | Thioredoxin reductase. | 0.684 |
Lcin_3329 | Lcin_3328 | Lcin_3329 | Lcin_3328 | Conjugative transfer protein TraF. | Conjugative transfer protein. | 0.947 |
Lcin_3329 | Lcin_3330 | Lcin_3329 | Lcin_3330 | Conjugative transfer protein TraF. | Conjugative transfer protein TraN. | 0.949 |
Lcin_3329 | ahpC_1 | Lcin_3329 | Lcin_0991 | Conjugative transfer protein TraF. | Alkyl hydroperoxide reductase. | 0.771 |
Lcin_3329 | trxB | Lcin_3329 | Lcin_2857 | Conjugative transfer protein TraF. | Thioredoxin reductase. | 0.694 |
Lcin_3330 | Lcin_1522 | Lcin_3330 | Lcin_1522 | Conjugative transfer protein TraN. | Putative conjugative transfer protein TraF. | 0.774 |
Lcin_3330 | Lcin_3328 | Lcin_3330 | Lcin_3328 | Conjugative transfer protein TraN. | Conjugative transfer protein. | 0.949 |
Lcin_3330 | Lcin_3329 | Lcin_3330 | Lcin_3329 | Conjugative transfer protein TraN. | Conjugative transfer protein TraF. | 0.949 |
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