Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cfaCyclopropane fatty acyl phospholipid synthase. (397 aa)    
Predicted Functional Partners:
tycC_2
Non-ribosomal peptide synthase.
    
 0.726
tycC_1
Peptide synthetase, non-ribosomal.
    
 0.668
Lcin_1849
acyl-CoA synthetase.
    
 0.633
Lcin_1132
Hypothetical protein.
       0.601
kdsD
Arabinose 5-phosphate isomerase.
     
 0.548
rkpA
Type I polyketide synthase WcbR.
  
  
 0.534
egtB
Methyltransferase.
 
  
 0.505
Lcin_0503
Saframycin Mx1 synthetase B.
    
 0.486
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.474
tam
Trans-aconitate methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
    
 0.448
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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