Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lcin_1237Putative aminoglycoside phosphotransferase. (333 aa)    
Predicted Functional Partners:
Lcin_1236
GNAT family acetyltransferase.
 
     0.934
Lcin_2549
Phosphotransferase enzyme family protein.
 
 
   0.782
Lcin_1024
Phosphotransferase enzyme family protein.
 
 
   0.778
Lcin_1235
Acetyltransferase (GNAT) family protein.
       0.773
Lcin_0153
GNAT family acetyltransferase.
 
     0.766
Lcin_3028
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.751
Lcin_2546
GNAT family acetyltransferase.
 
     0.745
Lcin_1525
Putative sex pilus assembly and mating pair protein TraG.
  
     0.722
Lcin_1521
Conjugal transfer mating pair stabilization protein TraN.
  
     0.720
Lcin_1514
Putative conjugative transfer protein TraB.
  
     0.714
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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