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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiDABC transporter permease. (446 aa)    
Predicted Functional Partners:
dppB
ABC transporter permease.
 
 
 0.997
hbpA
Bacterial extracellular solute-binding protein.
 
 0.989
gsiA
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 0.950
glnQ
ABC transporter ATP-binding protein.
     
 0.720
macB_2
ABC transporter permease.
   
 
  0.671
ybhF
ABC transporter ATP-binding protein.
    
 0.609
yadG
Transporter subunit: ATP-binding component of ABC superfamily protein.
    
 0.609
Lcin_0516
FtsX-like permease family protein.
   
 
  0.575
ftsE
Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.
    
 0.523
lolD_2-2
ABC transporter ATP binding protein.
   
 
  0.485
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.