Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cynT_2Inorganic transporter and to carbonic anhydrase (bi-functional). (769 aa)    
Predicted Functional Partners:
grsA
Peptide synthetase, non-ribosomal.
   
 0.688
crp_2
Sulfate permease with a cNMP binding motif protein.
 
 
 0.687
Lcin_0247
Sulfate transporter.
 
 
 0.678
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]
       0.666
yrdA
Transferase.
   
 0.665
Lcin_1747
Hypothetical protein.
 
     0.650
cynT_3
Carbonic anhydrase.
  
 
 
0.647
rkpA
Type I polyketide synthase WcbR.
   
 
 0.635
cynT_1
Carbonic anhydrase.
   
 
  0.561
pksM
Polyketide synthase.
    
 
 0.561
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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