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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynT_2Inorganic transporter and to carbonic anhydrase (bi-functional). (769 aa)    
Predicted Functional Partners:
grsA
Peptide synthetase, non-ribosomal.
   
 0.826
crp_2
Sulfate permease with a cNMP binding motif protein.
 
 
 0.806
rkpA
Type I polyketide synthase WcbR.
  
 0.805
Lcin_0247
Sulfate transporter.
 
 
 0.800
yrdA
Transferase.
   
 0.787
nuoM
NADH-quinone oxidoreductase chain M.
  
 
 0.752
pksM
Polyketide synthase.
   
 0.751
Lcin_1936
Sulfate permease.
 
 
0.727
petB
Ubiquinol--cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.695
Lcin_1747
Hypothetical protein.
 
     0.656
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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