Lcin_1329 protein (Legionella cincinnatiensis)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

Lcin_1329

IcmL-like protein. (254 aa)

Predicted Functional Partners:

hutG

0.777

Lcin_1328

0.773

skp

0.708

rplY

0.543

rpsN

0.525

rplX

0.523

rpsD

0.514

rplW

0.514

rpsU

0.512

rpmF

0.510

Your Current Organism:

Legionella cincinnatiensis

NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lcin_1328	Lcin_1329	Lcin_1328	Lcin_1329	Hypothetical protein.	IcmL-like protein.	0.773
Lcin_1328	hutG	Lcin_1328	Lcin_1330	Hypothetical protein.	Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.	0.757
Lcin_1329	Lcin_1328	Lcin_1329	Lcin_1328	IcmL-like protein.	Hypothetical protein.	0.773
Lcin_1329	hutG	Lcin_1329	Lcin_1330	IcmL-like protein.	Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.	0.777
Lcin_1329	rplW	Lcin_1329	Lcin_0639	IcmL-like protein.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.514
Lcin_1329	rplX	Lcin_1329	Lcin_0630	IcmL-like protein.	50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.523
Lcin_1329	rplY	Lcin_1329	Lcin_0562	IcmL-like protein.	50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.543
Lcin_1329	rpmF	Lcin_1329	Lcin_0364	IcmL-like protein.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.510
Lcin_1329	rpsD	Lcin_1329	Lcin_0618	IcmL-like protein.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.514
Lcin_1329	rpsN	Lcin_1329	Lcin_0628	IcmL-like protein.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.525
Lcin_1329	rpsU	Lcin_1329	Lcin_1210	IcmL-like protein.	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.512
Lcin_1329	skp	Lcin_1329	Lcin_2821	IcmL-like protein.	Outer membrane protein OmpH; Belongs to the skp family.	0.708
hutG	Lcin_1328	Lcin_1330	Lcin_1328	Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.	Hypothetical protein.	0.757
hutG	Lcin_1329	Lcin_1330	Lcin_1329	Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.	IcmL-like protein.	0.777
rplW	Lcin_1329	Lcin_0639	Lcin_1329	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	IcmL-like protein.	0.514
rplW	rplX	Lcin_0639	Lcin_0630	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.999
rplW	rplY	Lcin_0639	Lcin_0562	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.986
rplW	rpmF	Lcin_0639	Lcin_0364	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.993
rplW	rpsD	Lcin_0639	Lcin_0618	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.997
rplW	rpsN	Lcin_0639	Lcin_0628	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.998