Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lcin_1387Dolichyl-phosphate mannosyltransferase. (498 aa)    
Predicted Functional Partners:
Lcin_1290
Glycosyltransferase.
 
  0.809
wbbL
Putative glycosyl transferase.
 
 
 0.757
kfoC
Glycosyl transferase, family 2.
  
 
 0.756
rkpA
Type I polyketide synthase WcbR.
 
 0.717
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.693
tycC_2
Non-ribosomal peptide synthase.
  
 0.685
wcfH_1
Deacetylase.
  
 
 0.676
wcfH_2
Deacetylase.
  
 
 0.676
Lcin_1288
Polysaccharide deacetylase.
  
 
 0.676
Lcin_2066
Polysaccharide deacetylase domain-containing protein.
  
 
 0.676
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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