Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
bioC_2SAM dependent methyltransferase. (265 aa)    
Predicted Functional Partners:
tycC_2
Non-ribosomal peptide synthase.
    
 0.721
coq7
Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 
 0.689
Lcin_0503
Saframycin Mx1 synthetase B.
  
 
 0.626
ispB-2
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.598
rkpA
Type I polyketide synthase WcbR.
     
 0.593
ispB
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.586
tycC_1
Peptide synthetase, non-ribosomal.
    
 0.580
Lcin_1849
acyl-CoA synthetase.
    
 0.570
visC
Oxidoreductase with FAD/NAD(P)-binding domain protein.
     
 0.569
ubiH
2-octaprenyl-6-methoxyphenol hydroxylase.
     
 0.569
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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