yggR protein (Legionella cincinnatiensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

yggR

Transporter. (344 aa)

Predicted Functional Partners:

pilD

0.824

pilC

0.803

lspF

0.791

pilM

0.763

pilQ

0.736

yggS

0.707

lspE

0.594

pilB

0.592

pilO

0.582

evgS_2

0.562

Your Current Organism:

Legionella cincinnatiensis

NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
evgS_2	lspE	Lcin_0448	Lcin_2523	Sensor histidine kinase.	Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.527
evgS_2	lspF	Lcin_0448	Lcin_0391	Sensor histidine kinase.	Type II secretory pathway protein LspF.	0.437
evgS_2	pilB	Lcin_0448	Lcin_0252	Sensor histidine kinase.	Pilus assembly protein PilB.	0.527
evgS_2	pilC	Lcin_0448	Lcin_0253	Sensor histidine kinase.	Pilus assembly protein PilC.	0.437
evgS_2	pilM	Lcin_0448	Lcin_1391	Sensor histidine kinase.	Tfp pilus assembly protein, ATPase PilM.	0.524
evgS_2	yggR	Lcin_0448	Lcin_1415	Sensor histidine kinase.	Transporter.	0.562
lspE	evgS_2	Lcin_2523	Lcin_0448	Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Sensor histidine kinase.	0.527
lspE	lspF	Lcin_2523	Lcin_0391	Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Type II secretory pathway protein LspF.	0.985
lspE	pilC	Lcin_2523	Lcin_0253	Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Pilus assembly protein PilC.	0.955
lspE	pilD	Lcin_2523	Lcin_0254	Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.951
lspE	pilM	Lcin_2523	Lcin_1391	Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Tfp pilus assembly protein, ATPase PilM.	0.580
lspE	pilO	Lcin_2523	Lcin_1393	Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Tfp pilus assembly protein PilO.	0.580
lspE	pilQ	Lcin_2523	Lcin_1395	Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Type IV pilus (Tfp) assembly protein PilQ.	0.670
lspE	yggR	Lcin_2523	Lcin_1415	Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Transporter.	0.594
lspF	evgS_2	Lcin_0391	Lcin_0448	Type II secretory pathway protein LspF.	Sensor histidine kinase.	0.437
lspF	lspE	Lcin_0391	Lcin_2523	Type II secretory pathway protein LspF.	Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.985
lspF	pilB	Lcin_0391	Lcin_0252	Type II secretory pathway protein LspF.	Pilus assembly protein PilB.	0.986
lspF	pilC	Lcin_0391	Lcin_0253	Type II secretory pathway protein LspF.	Pilus assembly protein PilC.	0.617
lspF	pilD	Lcin_0391	Lcin_0254	Type II secretory pathway protein LspF.	Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.952
lspF	pilM	Lcin_0391	Lcin_1391	Type II secretory pathway protein LspF.	Tfp pilus assembly protein, ATPase PilM.	0.581