Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_1438Hypothetical protein. (373 aa)    
Predicted Functional Partners:
Lcin_1437
Hypothetical protein.
     0.957
kshA
Rieske 2Fe-2S domain protein.
 
     0.849
Lcin_2594
Coenzyme F390 synthetase FtsA.
 
     0.669
Lcin_2595
Zn-dependent hydrolase GumP.
 
     0.606
Lcin_1920
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
 
     0.547
sseJ_2
Lipolytic enzyme, GDSL family.
  
     0.523
moeZ_2
Thiazole biosynthesis adenylyltransferase ThiF.
       0.492
cphA_1
Cyanophycin synthetase.
    
  0.438
cphA_2
Cyanophycin synthetase.
    
  0.438
gshA
Glutamate--cysteine ligase.
    
 0.434
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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