Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lcin_1446LphB. (510 aa)    
Predicted Functional Partners:
Lcin_1445
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
 
    0.916
Lcin_1758
Hypothetical protein.
  
     0.767
iraA
Small-molecule methyltransferase IraA.
  
     0.753
secA_3
Coiled-coil protein.
  
     0.748
Lcin_0196
CAAX amino terminal protease self- immunity.
  
     0.739
Lcin_1531
Putative Acetyltransferase, GNAT family.
  
     0.738
Lcin_1793
NHL repeat protein.
  
  
 0.712
Lcin_0933
Outer membrane efflux protein.
  
     0.705
Lcin_1637
Fe-S protein.
  
     0.702
Lcin_1958
Hypothetical protein.
  
 
 0.693
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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