STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_1493ATP-dependent DNA helicase. (504 aa)    
Predicted Functional Partners:
noc
Nucleoid occlusion protein; Belongs to the ParB family.
 
     0.649
Lcin_1497
Initiator Replication protein.
 
     0.647
hsdR_1
Type-1 restriction system, restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.607
hsdR_2
Putative type I restriction enzyme R protein.
  
    0.607
Lcin_0126
ecoKI restriction-modification system protein HsdS.
  
    0.598
hsdS
Putative type I restriction-modification system (methylase S subunit).
  
    0.598
traI_3
Putative conjugative transfer protein TraI.
  
     0.587
niaR
Transcriptional regulator.
  
 
  0.584
oprB
Porin B precursor.
  
     0.571
Lcin_1202
Hypothetical protein.
 
     0.571
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.