Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_1594Peptidase family M23. (505 aa)    
Predicted Functional Partners:
nlpD
Hypothetical protein.
  
   
 0.757
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.
       0.694
envC
Peptidase, M23 family.
  
   
 0.692
amiB
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.649
mltD
Membrane-bound lytic murein transglycosylase D.
 
  
 0.630
lepB_2
Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.526
cphA_1
Cyanophycin synthetase.
    
 0.466
cphA_2
Cyanophycin synthetase.
    
 0.466
mrcA
Putative peptidoglycan synthetase, penicillin-binding protein 1A.
  
   
 0.438
ctpA
Carboxy-terminal protease; Belongs to the peptidase S41A family.
 
 
 
 0.418
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.