STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_1619Hypothetical protein. (54 aa)    
Predicted Functional Partners:
evgS_2
Sensor histidine kinase.
  
 0.739
scpA
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
   
 
 0.699
arcB_4
Sensory box histidine kinase/response regulator.
   
  0.694
arcB_1
Sensory histidine-kinase / response regulator.
   
  0.694
letS
Legionella transmission sensor LetS.
   
  0.692
Lcin_3402
LuxR family transcriptional regulator.
  
  0.677
cheA
Chemotaxis histidine kinase.
    
  0.668
cyaA_2
Guanylate/adenylate cyclase.
  
 
  0.659
sidJ
Substrate of the Dot/Icm secretion system.
    
   0.613
bcp
Acetylpolyamine aminohydrolase.
    
  0.531
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.