Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
csiRHTH-type transcriptional repressor CsiR. (236 aa)    
Predicted Functional Partners:
metG_2
methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.791
Lcin_1693
Cupin domain protein.
       0.791
iucD
L-lysine N6-monooxygenase.
       0.785
ats
Acetyltransferase (GNAT) family protein.
 
     0.703
prmB
N5-glutamine methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
    
   0.696
prpB
2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
 
  
 0.539
kshA
Rieske 2Fe-2S domain protein.
     
 0.489
Lcin_1696
Prolyl oligopeptidase; Belongs to the UPF0255 family.
 
     0.467
Lcin_2340
2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase.
 
  
  0.446
Lcin_1689
Coiled-coil protein.
       0.443
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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