Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
iucDL-lysine N6-monooxygenase. (441 aa)    
Predicted Functional Partners:
tycC_2
Non-ribosomal peptide synthase.
  
 0.965
iucB
N(6)-hydroxylysine O-acetyltransferase.
 
 0.943
frgA
Siderophore biosynthetic enzyme FrgA.
 
 
 0.916
pksN
Peptide synthetase, non-ribosomal.
  
 0.910
tycC_1
Peptide synthetase, non-ribosomal.
  
 0.900
Lcin_1849
acyl-CoA synthetase.
  
 0.878
metG_2
methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.825
Lcin_1693
Cupin domain protein.
       0.790
csiR
HTH-type transcriptional repressor CsiR.
       0.785
mbtH
MbtH-like protein.
 
  
 0.782
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.