Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lcin_1738 | Lcin_1739 | Lcin_1738 | Lcin_1739 | Hypothetical protein. | Capsule biosynthesis protein. | 0.784 |
Lcin_1738 | Lcin_1741 | Lcin_1738 | Lcin_1741 | Hypothetical protein. | Hypothetical protein. | 0.785 |
Lcin_1738 | Lcin_1742 | Lcin_1738 | Lcin_1742 | Hypothetical protein. | Condensation domain protein. | 0.787 |
Lcin_1738 | Lcin_1743 | Lcin_1738 | Lcin_1743 | Hypothetical protein. | Hypothetical protein. | 0.787 |
Lcin_1738 | Lcin_1744 | Lcin_1738 | Lcin_1744 | Hypothetical protein. | Epi-isozizaene 5-monooxygenase/(E)-beta-farnesene synthase. | 0.762 |
Lcin_1738 | Lcin_1745 | Lcin_1738 | Lcin_1745 | Hypothetical protein. | Hypothetical protein. | 0.500 |
Lcin_1738 | desA | Lcin_1738 | Lcin_1740 | Hypothetical protein. | Delta(12)-fatty-acid desaturase. | 0.791 |
Lcin_1739 | Lcin_1738 | Lcin_1739 | Lcin_1738 | Capsule biosynthesis protein. | Hypothetical protein. | 0.784 |
Lcin_1739 | Lcin_1741 | Lcin_1739 | Lcin_1741 | Capsule biosynthesis protein. | Hypothetical protein. | 0.803 |
Lcin_1739 | Lcin_1742 | Lcin_1739 | Lcin_1742 | Capsule biosynthesis protein. | Condensation domain protein. | 0.778 |
Lcin_1739 | Lcin_1743 | Lcin_1739 | Lcin_1743 | Capsule biosynthesis protein. | Hypothetical protein. | 0.778 |
Lcin_1739 | Lcin_1744 | Lcin_1739 | Lcin_1744 | Capsule biosynthesis protein. | Epi-isozizaene 5-monooxygenase/(E)-beta-farnesene synthase. | 0.756 |
Lcin_1739 | Lcin_1745 | Lcin_1739 | Lcin_1745 | Capsule biosynthesis protein. | Hypothetical protein. | 0.626 |
Lcin_1739 | cphA_1 | Lcin_1739 | Lcin_1239 | Capsule biosynthesis protein. | Cyanophycin synthetase. | 0.735 |
Lcin_1739 | cphA_2 | Lcin_1739 | Lcin_2333 | Capsule biosynthesis protein. | Cyanophycin synthetase. | 0.735 |
Lcin_1739 | desA | Lcin_1739 | Lcin_1740 | Capsule biosynthesis protein. | Delta(12)-fatty-acid desaturase. | 0.784 |
Lcin_1739 | murD | Lcin_1739 | Lcin_1980 | Capsule biosynthesis protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.617 |
Lcin_1741 | Lcin_1738 | Lcin_1741 | Lcin_1738 | Hypothetical protein. | Hypothetical protein. | 0.785 |
Lcin_1741 | Lcin_1739 | Lcin_1741 | Lcin_1739 | Hypothetical protein. | Capsule biosynthesis protein. | 0.803 |
Lcin_1741 | Lcin_1742 | Lcin_1741 | Lcin_1742 | Hypothetical protein. | Condensation domain protein. | 0.791 |
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