Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_1751Sensory protein (PAS domain). (512 aa)    
Predicted Functional Partners:
cyaA_1
Guanylate cyclase.
 
  
  0.666
Lcin_3155
Ankyrin repeats (3 copies).
  
     0.605
secA_3
Coiled-coil protein.
 
     0.596
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.594
Lcin_2804
Ankyrin repeat protein.
  
     0.577
gmr_3
Regulatory protein (GGDEF domain).
  
 
 0.568
luxQ
Sensor histidine kinase.
  
  
 0.546
arcB_1
Sensory histidine-kinase / response regulator.
  
 0.539
iraA
Small-molecule methyltransferase IraA.
  
     0.535
evgS_2
Sensor histidine kinase.
    
 0.529
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.