Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lcin_0503 | Lcin_1779 | Lcin_0503 | Lcin_1779 | Saframycin Mx1 synthetase B. | Peptide synthetase, non-ribosomal. | 0.995 |
Lcin_0503 | Lcin_1849 | Lcin_0503 | Lcin_1849 | Saframycin Mx1 synthetase B. | acyl-CoA synthetase. | 0.999 |
Lcin_0503 | fabD_2 | Lcin_0503 | Lcin_2187 | Saframycin Mx1 synthetase B. | Malonyl CoA-ACP transacylase. | 0.993 |
Lcin_0503 | lgrB | Lcin_0503 | Lcin_1781 | Saframycin Mx1 synthetase B. | Polyketide synthase. | 0.991 |
Lcin_0503 | lgrD_2 | Lcin_0503 | Lcin_1465 | Saframycin Mx1 synthetase B. | Peptide synthetase, non-ribosomal. | 0.993 |
Lcin_0503 | mbtH | Lcin_0503 | Lcin_1817 | Saframycin Mx1 synthetase B. | MbtH-like protein. | 0.841 |
Lcin_0503 | pksN | Lcin_0503 | Lcin_2133 | Saframycin Mx1 synthetase B. | Peptide synthetase, non-ribosomal. | 0.997 |
Lcin_0503 | tycC_1 | Lcin_0503 | Lcin_2134 | Saframycin Mx1 synthetase B. | Peptide synthetase, non-ribosomal. | 0.998 |
Lcin_0503 | tycC_2 | Lcin_0503 | Lcin_1179 | Saframycin Mx1 synthetase B. | Non-ribosomal peptide synthase. | 0.999 |
Lcin_0503 | tycC_4 | Lcin_0503 | Lcin_1778 | Saframycin Mx1 synthetase B. | Non-ribosomal peptide synthase. | 0.993 |
Lcin_1779 | Lcin_0503 | Lcin_1779 | Lcin_0503 | Peptide synthetase, non-ribosomal. | Saframycin Mx1 synthetase B. | 0.995 |
Lcin_1779 | Lcin_1849 | Lcin_1779 | Lcin_1849 | Peptide synthetase, non-ribosomal. | acyl-CoA synthetase. | 0.999 |
Lcin_1779 | fabD_2 | Lcin_1779 | Lcin_2187 | Peptide synthetase, non-ribosomal. | Malonyl CoA-ACP transacylase. | 0.995 |
Lcin_1779 | lgrB | Lcin_1779 | Lcin_1781 | Peptide synthetase, non-ribosomal. | Polyketide synthase. | 0.997 |
Lcin_1779 | lgrD_2 | Lcin_1779 | Lcin_1465 | Peptide synthetase, non-ribosomal. | Peptide synthetase, non-ribosomal. | 0.995 |
Lcin_1779 | mbtH | Lcin_1779 | Lcin_1817 | Peptide synthetase, non-ribosomal. | MbtH-like protein. | 0.999 |
Lcin_1779 | pksN | Lcin_1779 | Lcin_2133 | Peptide synthetase, non-ribosomal. | Peptide synthetase, non-ribosomal. | 0.999 |
Lcin_1779 | tycC_1 | Lcin_1779 | Lcin_2134 | Peptide synthetase, non-ribosomal. | Peptide synthetase, non-ribosomal. | 0.999 |
Lcin_1779 | tycC_2 | Lcin_1779 | Lcin_1179 | Peptide synthetase, non-ribosomal. | Non-ribosomal peptide synthase. | 0.999 |
Lcin_1779 | tycC_4 | Lcin_1779 | Lcin_1778 | Peptide synthetase, non-ribosomal. | Non-ribosomal peptide synthase. | 0.998 |
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