Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tauD_2Taurine catabolism dioxygenase TauD. (325 aa)    
Predicted Functional Partners:
tycC_2
Non-ribosomal peptide synthase.
  
 0.961
Lcin_1466
Non-ribosomal peptide synthase.
  
 0.926
mbtH
MbtH-like protein.
 
   
 0.879
tycC_3
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
    0.857
pksN
Peptide synthetase, non-ribosomal.
  
 0.821
fhuF
Ferric iron reductase protein FhuF.
 
     0.818
yhfQ
Periplasmic binding protein.
 
     0.811
Lcin_1849
acyl-CoA synthetase.
  
 0.811
fhuB
FecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.808
Lcin_1780
Peptide synthetase, non-ribosomal.
    0.781
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.