STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhuCFerrichrome ABC transporter ATP-binding protein. (275 aa)    
Predicted Functional Partners:
fhuB
FecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
yhfQ
Periplasmic binding protein.
 
 
 0.987
fhuF
Ferric iron reductase protein FhuF.
 
    0.862
tauD_2
Taurine catabolism dioxygenase TauD.
       0.773
tycC_2
Non-ribosomal peptide synthase.
 
  
 0.728
pksN
Peptide synthetase, non-ribosomal.
 
  
 0.714
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
  
 0.647
hisC
Histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase).
    
 0.595
lptB
Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein.
  
  
 
0.587
mbtH
MbtH-like protein.
  
  
 0.575
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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