Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fhuBFecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (666 aa)    
Predicted Functional Partners:
fhuC
Ferrichrome ABC transporter ATP-binding protein.
 
 0.999
yhfQ
Periplasmic binding protein.
 
 
 0.985
fhuF
Ferric iron reductase protein FhuF.
 
  
 0.911
tauD_2
Taurine catabolism dioxygenase TauD.
 
     0.808
mbtH
MbtH-like protein.
 
  
 0.666
tycC_2
Non-ribosomal peptide synthase.
  
  
 0.634
fecI
Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.611
pksN
Peptide synthetase, non-ribosomal.
  
  
 0.611
merA
Oxydoreductase.
     
 0.600
lpdA
Dihydrolipoyl dehydrogenase.
     
 0.600
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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