Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lcin_0516 | lolD_2 | Lcin_0516 | Lcin_1907 | FtsX-like permease family protein. | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.872 |
| Lcin_0516 | lolD_2-2 | Lcin_0516 | Lcin_0515 | FtsX-like permease family protein. | ABC transporter ATP binding protein. | 0.975 |
| Lcin_0516 | lolE | Lcin_0516 | Lcin_1906 | FtsX-like permease family protein. | Outer membrane-specific lipoprotein ABC transporter subunit. | 0.663 |
| Lcin_0516 | macB_1 | Lcin_0516 | Lcin_0931 | FtsX-like permease family protein. | ABC transporter ATP-binding protein. | 0.878 |
| lolA | lolD_2 | Lcin_2859 | Lcin_1907 | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.938 |
| lolA | lolD_2-2 | Lcin_2859 | Lcin_0515 | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter ATP binding protein. | 0.880 |
| lolA | lolE | Lcin_2859 | Lcin_1906 | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane-specific lipoprotein ABC transporter subunit. | 0.961 |
| lolA | macB_1 | Lcin_2859 | Lcin_0931 | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter ATP-binding protein. | 0.777 |
| lolA | pal | Lcin_2859 | Lcin_3065 | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.761 |
| lolA | yaeT | Lcin_2859 | Lcin_2820 | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.679 |
| lolA | yfiO | Lcin_2859 | Lcin_2206 | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Competence lipoprotein comL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.610 |
| lolD_2 | Lcin_0516 | Lcin_1907 | Lcin_0516 | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | FtsX-like permease family protein. | 0.872 |
| lolD_2 | lolA | Lcin_1907 | Lcin_2859 | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.938 |
| lolD_2 | lolE | Lcin_1907 | Lcin_1906 | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | Outer membrane-specific lipoprotein ABC transporter subunit. | 0.996 |
| lolD_2 | macB_1 | Lcin_1907 | Lcin_0931 | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | ABC transporter ATP-binding protein. | 0.611 |
| lolD_2 | macB_2 | Lcin_1907 | Lcin_0930 | Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | ABC transporter permease. | 0.990 |
| lolD_2-2 | Lcin_0516 | Lcin_0515 | Lcin_0516 | ABC transporter ATP binding protein. | FtsX-like permease family protein. | 0.975 |
| lolD_2-2 | lolA | Lcin_0515 | Lcin_2859 | ABC transporter ATP binding protein. | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.880 |
| lolD_2-2 | lolE | Lcin_0515 | Lcin_1906 | ABC transporter ATP binding protein. | Outer membrane-specific lipoprotein ABC transporter subunit. | 0.967 |
| lolD_2-2 | macB_1 | Lcin_0515 | Lcin_0931 | ABC transporter ATP binding protein. | ABC transporter ATP-binding protein. | 0.520 |
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