STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oxyRLysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
ahpD
Alkyl hydroperoxide reductase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
   
 0.690
gltC_2
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.643
ahpC_2
Alkyl hydroperoxide reductase.
 
     0.642
cynR_1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.598
lysR_3
LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.527
cynR_2
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.521
dmlR_1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.512
gltC_1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.501
lysR_4
LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.494
dmlR_3
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.457
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.