Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lcin_0855 | Lcin_2004 | Lcin_0855 | Lcin_2004 | Hypothetical protein. | IcmK protein. | 0.691 |
Lcin_0855 | Lcin_3121 | Lcin_0855 | Lcin_3121 | Hypothetical protein. | Neurogenic locus notch like protein precursor. | 0.691 |
Lcin_0855 | dotC | Lcin_0855 | Lcin_0693 | Hypothetical protein. | Defect in organelle trafficking lipoprotein DotC. | 0.691 |
Lcin_0855 | dotD | Lcin_0855 | Lcin_0692 | Hypothetical protein. | Lipoprotein DotD. | 0.691 |
Lcin_0855 | dotF | Lcin_0855 | Lcin_2002 | Hypothetical protein. | Component of the Dot/Icm secretion system. | 0.691 |
Lcin_0855 | dotG | Lcin_0855 | Lcin_2003 | Hypothetical protein. | IcmE/DotG protein. | 0.995 |
Lcin_0855 | lphA | Lcin_0855 | Lcin_2007 | Hypothetical protein. | LphA (DotK). | 0.691 |
Lcin_0855 | yiaD | Lcin_0855 | Lcin_2326 | Hypothetical protein. | Lipoprotein. | 0.691 |
Lcin_2001 | Lcin_2004 | Lcin_2001 | Lcin_2004 | IcmC (DotE). | IcmK protein. | 0.777 |
Lcin_2001 | dotF | Lcin_2001 | Lcin_2002 | IcmC (DotE). | Component of the Dot/Icm secretion system. | 0.801 |
Lcin_2001 | dotG | Lcin_2001 | Lcin_2003 | IcmC (DotE). | IcmE/DotG protein. | 0.794 |
Lcin_2001 | icmD_5 | Lcin_2001 | Lcin_2000 | IcmC (DotE). | IcmD (DotP). | 0.687 |
Lcin_2001 | lphA | Lcin_2001 | Lcin_2007 | IcmC (DotE). | LphA (DotK). | 0.602 |
Lcin_2004 | Lcin_0855 | Lcin_2004 | Lcin_0855 | IcmK protein. | Hypothetical protein. | 0.691 |
Lcin_2004 | Lcin_2001 | Lcin_2004 | Lcin_2001 | IcmK protein. | IcmC (DotE). | 0.777 |
Lcin_2004 | Lcin_3121 | Lcin_2004 | Lcin_3121 | IcmK protein. | Neurogenic locus notch like protein precursor. | 0.691 |
Lcin_2004 | dotC | Lcin_2004 | Lcin_0693 | IcmK protein. | Defect in organelle trafficking lipoprotein DotC. | 0.938 |
Lcin_2004 | dotD | Lcin_2004 | Lcin_0692 | IcmK protein. | Lipoprotein DotD. | 0.740 |
Lcin_2004 | dotF | Lcin_2004 | Lcin_2002 | IcmK protein. | Component of the Dot/Icm secretion system. | 0.939 |
Lcin_2004 | dotG | Lcin_2004 | Lcin_2003 | IcmK protein. | IcmE/DotG protein. | 0.999 |
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