STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_2019Glucan 1,4-alpha-glucosidase. (422 aa)    
Predicted Functional Partners:
Lcin_0801
Aminopeptidase.
  
     0.720
glk
Glucokinase; Belongs to the bacterial glucokinase family.
    
 0.700
celC
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 0.675
Lcin_1019
Putative secreted esterase.
  
  
  0.623
treF
Alpha,alpha-trehalase.
  
  
  0.592
mexA
Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.565
Lcin_3423
Putative solute carrier protein.
  
     0.564
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.508
Lcin_2152
Hypothetical protein.
  
     0.499
Lcin_1157
Calcium-transporting ATPase.
  
    0.479
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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