Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lcin_2044Coenzyme F390 synthetase. (486 aa)    
Predicted Functional Partners:
Lcin_2043
Pyoverdine biosynthesis protein PvcA.
       0.757
Lcin_2419
Dihydroorotate dehydrogenase electron transfer subunit.
 
  
 0.741
lldD
FMN-dependent dehydrogenase.
       0.735
astD
Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
    
  0.596
mmsA
Methylmalonate-semialdehyde dehydrogenase [acylating] (MMSDH), oxidoreductase.
    
  0.596
ywdH
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.596
gabD1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.596
aldA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.596
yneI
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.596
Lcin_0494
Acylaminoacyl peptidase.
  
     0.592
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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