STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pilE_1Type-IV pilin. (139 aa)    
Predicted Functional Partners:
pilM
Tfp pilus assembly protein, ATPase PilM.
 
   
 0.860
pilN
Tfp pilus assembly protein PilN.
 
  
 0.844
pilP
Tfp pilus assembly protein PilP.
  
  
 0.842
pilO
Tfp pilus assembly protein PilO.
 
  
 0.834
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
   
 0.821
pilE_2
Tfp pilus assembly protein, major type IV pilin class A; Belongs to the N-Me-Phe pilin family.
 
  
 0.753
pilZ_1
Type 4 fimbrial biogenesis protein PilZ.
  
   
 0.752
Lcin_2161
Hypothetical protein.
  
  
 0.720
pilF
Twitching motility protein PilF.
  
   
 0.697
fimV
FimV protein.
  
     0.593
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.