Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lcin_2419 | coxB | Lcin_2419 | Lcin_0912 | Dihydroorotate dehydrogenase electron transfer subunit. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.553 |
| Lcin_2419 | uhpC_2 | Lcin_2419 | Lcin_2070 | Dihydroorotate dehydrogenase electron transfer subunit. | Major facilitator family transporter. | 0.439 |
| Lcin_2419 | xylA | Lcin_2419 | Lcin_1800 | Dihydroorotate dehydrogenase electron transfer subunit. | Xylene monooxygenase. | 0.873 |
| arnT | deoB | Lcin_2068 | Lcin_2071 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.505 |
| arnT | uhpC_1 | Lcin_2068 | Lcin_2069 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Major facilitator family transporter. | 0.524 |
| arnT | uhpC_2 | Lcin_2068 | Lcin_2070 | Dolichyl-phosphate-mannose-protein mannosyltransferase. | Major facilitator family transporter. | 0.508 |
| coxB | Lcin_2419 | Lcin_0912 | Lcin_2419 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Dihydroorotate dehydrogenase electron transfer subunit. | 0.553 |
| coxB | trxB | Lcin_0912 | Lcin_2857 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Thioredoxin reductase. | 0.440 |
| coxB | uhpC_2 | Lcin_0912 | Lcin_2070 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Major facilitator family transporter. | 0.752 |
| coxB | xylA | Lcin_0912 | Lcin_1800 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Xylene monooxygenase. | 0.752 |
| deoB | arnT | Lcin_2071 | Lcin_2068 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Dolichyl-phosphate-mannose-protein mannosyltransferase. | 0.505 |
| deoB | hslU | Lcin_2071 | Lcin_2073 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.488 |
| deoB | hslV | Lcin_2071 | Lcin_2072 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Peptidase component of the HslUV protease (Heat shock protein); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.488 |
| deoB | uhpC_1 | Lcin_2071 | Lcin_2069 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Major facilitator family transporter. | 0.790 |
| deoB | uhpC_2 | Lcin_2071 | Lcin_2070 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Major facilitator family transporter. | 0.792 |
| hslU | deoB | Lcin_2073 | Lcin_2071 | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.488 |
| hslU | hslV | Lcin_2073 | Lcin_2072 | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Peptidase component of the HslUV protease (Heat shock protein); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.999 |
| hslU | uhpC_1 | Lcin_2073 | Lcin_2069 | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Major facilitator family transporter. | 0.470 |
| hslU | uhpC_2 | Lcin_2073 | Lcin_2070 | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Major facilitator family transporter. | 0.488 |
| hslV | deoB | Lcin_2072 | Lcin_2071 | Peptidase component of the HslUV protease (Heat shock protein); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.488 |
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