yddE protein (Legionella cincinnatiensis) - STRING interaction network

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[Homology]

Score

yddE

Epimerase. (262 aa)

Predicted Functional Partners:

dapE

0.725

lysAC

0.717

argE

0.520

csp_2

0.471

mnmC

0.415

cpg2

0.414

Lcin_3107

0.414

prpD

0.407

prpC

0.407

trpE

0.404

Your Current Organism:

Legionella cincinnatiensis

NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lcin_3107	lysAC	Lcin_3107	Lcin_2376	Succinyl-diaminopimelate desuccinylase.	Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.690
Lcin_3107	yddE	Lcin_3107	Lcin_2189	Succinyl-diaminopimelate desuccinylase.	Epimerase.	0.414
argE	dapE	Lcin_1169	Lcin_1357	Acetylornithine deacetylase.	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.	0.744
argE	lysAC	Lcin_1169	Lcin_2376	Acetylornithine deacetylase.	Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.570
argE	yddE	Lcin_1169	Lcin_2189	Acetylornithine deacetylase.	Epimerase.	0.520
cpg2	dapE	Lcin_0061	Lcin_1357	Carboxypeptidase G2 and to acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase.	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.	0.533
cpg2	lysAC	Lcin_0061	Lcin_2376	Carboxypeptidase G2 and to acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase.	Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.570
cpg2	yddE	Lcin_0061	Lcin_2189	Carboxypeptidase G2 and to acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase.	Epimerase.	0.414
csp_2	yddE	Lcin_2190	Lcin_2189	Cold shock protein.	Epimerase.	0.471
dapE	argE	Lcin_1357	Lcin_1169	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.	Acetylornithine deacetylase.	0.744
dapE	cpg2	Lcin_1357	Lcin_0061	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.	Carboxypeptidase G2 and to acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase.	0.533
dapE	lysAC	Lcin_1357	Lcin_2376	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.	Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.570
dapE	yddE	Lcin_1357	Lcin_2189	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.	Epimerase.	0.725
lysAC	Lcin_3107	Lcin_2376	Lcin_3107	Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Succinyl-diaminopimelate desuccinylase.	0.690
lysAC	argE	Lcin_2376	Lcin_1169	Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Acetylornithine deacetylase.	0.570
lysAC	cpg2	Lcin_2376	Lcin_0061	Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Carboxypeptidase G2 and to acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase.	0.570
lysAC	dapE	Lcin_2376	Lcin_1357	Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.	0.570
lysAC	trpE	Lcin_2376	Lcin_2925	Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Anthranilate synthase.	0.584
lysAC	yddE	Lcin_2376	Lcin_2189	Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Epimerase.	0.717
mnmC	prpC	Lcin_0288	Lcin_0286	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	2-methylcitrate synthase; Belongs to the citrate synthase family.	0.785