STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_2261Putative transporter. (187 aa)    
Predicted Functional Partners:
yjjG
Haloacid dehalogenase.
  
  
  0.627
capP
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
  
  
  0.623
aprX
Subtilisin-like serine protease.
  
  
  0.613
pta
Phosphate acetyl/butaryl transferase.
    
  0.579
tycC_2
Non-ribosomal peptide synthase.
   
 
  0.572
Lcin_0854
Protein with a bacterial immunoglobulin-like domain protein.
   
    0.532
Lcin_1890
Hypothetical protein.
   
    0.532
Lcin_2781
Protein with a bacterial immunoglobulin-like domain protein.
   
    0.532
purD
Phosphoribosylamine-glycine ligase; Belongs to the GARS family.
    
  0.510
Lcin_2260
Hypothetical protein.
       0.508
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.