Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ycaC_1YcaC related amidohydrolase. (204 aa)    
Predicted Functional Partners:
apc3
Acetophenone carboxylase gamma subunit.
    
  0.692
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.670
Lcin_0558
Putative Antitoxin higA-2.
   
    0.644
trpE
Anthranilate synthase.
    
 0.627
wrbA
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
   
    0.585
katA
Catalase; Belongs to the catalase family.
   
   0.568
pntA
Pyridine nucleotide transhydrogenase, alpha subunit.
       0.525
pnaB
NAD(P) transhydrogenase subunit beta.
       0.525
tycC_2
Non-ribosomal peptide synthase.
   
 
 0.492
yvgN
Oxidoreductase,aldo/keto reductase family.
   
 
  0.462
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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