Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lcin_2314Zinc-iron permease (ZIP) family metal cation transporter. (252 aa)    
Predicted Functional Partners:
maf
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.840
fieF
Cation-efflux family protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.729
Lcin_2993
Hypothetical protein.
  
     0.727
Lcin_3114
Protein-tyrosine phosphatase.
  
     0.723
dotA_2
Hypothetical protein.
  
   0.721
Lcin_1831
Sphingomyelin phosphodiesterase.
  
     0.720
Lcin_2475
Acid sphingomyelinase-like phosphodiesterase.
  
     0.720
dotG
IcmE/DotG protein.
 
     0.715
Lcin_0977
Protein containing a histone methylation DOT1 motif protein.
 
     0.675
Lcin_2723
Protein LvrA.
  
     0.673
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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