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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjbJ_1Stress response protein; Belongs to the UPF0337 (CsbD) family. (67 aa)    
Predicted Functional Partners:
osmY
Lipoprotein.
 
    0.685
Lcin_2334
PRC-barrel domain protein.
       0.683
Lcin_1892
Transmembrane protein.
 
    0.666
Lcin_2329
Transmembrane protein.
  
    0.601
Lcin_0257
Hypothetical protein.
  
    0.557
Lcin_1060
Putative lipoprotein.
  
    0.421
Lcin_1061
Hemolysin, lipoprotein.
  
    0.421
Lcin_3073
Phospholipid binding protein.
  
    0.421
cphB
Cyanophycinase; Belongs to the peptidase S51 family.
       0.400
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.