STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dps2_2Ferritin; Belongs to the Dps family. (165 aa)    
Predicted Functional Partners:
clpS
Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.851
wrbA
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
   
  
 0.561
Lcin_0259
Sigma 54 modulation protein YhbH.
  
  
 0.557
Lcin_0797
Serine protein kinase.
   
    0.510
ahpC_1
Alkyl hydroperoxide reductase.
  
  
 0.480
ahpC_2
Alkyl hydroperoxide reductase.
  
  
 0.480
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
       0.475
yhbH
Ribosome-associated, sigma 54 modulation protein.
   
    0.471
copA_1
Cation transport ATPase.
  
  
 0.464
ohrB_1
Organic hydroperoxide resistance protein.
   
  
 0.432
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.