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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
puuAGlutamine synthase; Belongs to the glutamine synthetase family. (456 aa)    
Predicted Functional Partners:
gabD1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.846
mdh_1
Alcohol dehydrogenase.
 
  
 0.838
guaA
GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.822
guaA_2
Glutamine amidotransferase, class I.
 
  
 0.812
xylA
Xylene monooxygenase.
   
 
 0.809
argF
Ornithine carbamoyltransferase.
  
 
 0.789
putA
Bifunctional PutA protein (proline dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.752
rkpA
Type I polyketide synthase WcbR.
     
 0.752
Lcin_0247
Sulfate transporter.
   
 
 0.735
Lcin_1936
Sulfate permease.
   
 
 0.735
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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