STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_2419Dihydroorotate dehydrogenase electron transfer subunit. (254 aa)    
Predicted Functional Partners:
xylA
Xylene monooxygenase.
 
 
 0.873
evgS_1
Sensory box histidine kinase/response regulator.
  
  
 0.860
Lcin_1054
Cytochrome P450.
 
  
 0.837
Lcin_2966
Regulatory protein, SyrP-like protein.
  
  
  0.816
gmr_3
Regulatory protein (GGDEF domain).
  
 
 0.798
arcB_4
Sensory box histidine kinase/response regulator.
  
 
 0.795
arcB_1
Sensory histidine-kinase / response regulator.
  
 
 0.795
putA
Bifunctional PutA protein (proline dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.790
cqsS
Sensor histidine kinase/response regulator.
  
  
  0.789
evgS_2
Sensor histidine kinase.
  
 
 0.775
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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