STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_2470Ankyrin repeat protein. (610 aa)    
Predicted Functional Partners:
Lcin_2239
Hypothetical protein.
    
 0.959
Lcin_1011
Thaumatin domain-containing protein.
  
 
  0.833
Lcin_2601
6,7-dimethyl-8-ribityllumazine synthase; Belongs to the DMRL synthase family.
  
 
   0.771
Lcin_1599
Pyruvate phosphate dikinase.
 
  
  0.765
Lcin_1238
Ankyrin repeats (3 copies).
  
     0.760
rkpA
Type I polyketide synthase WcbR.
    
 0.747
Lcin_0134
Bile acid beta-glucosidase.
  
 
  0.736
Lcin_0148
Membrane protein.
  
     0.727
pksM
Polyketide synthase.
    
 0.723
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.722
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.