STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fimVFimV protein. (550 aa)    
Predicted Functional Partners:
pilO
Tfp pilus assembly protein PilO.
  
  
 0.792
pilN
Tfp pilus assembly protein PilN.
  
  
 0.784
pilM
Tfp pilus assembly protein, ATPase PilM.
  
  
 0.782
pilP
Tfp pilus assembly protein PilP.
  
  
 0.770
pilZ_1
Type 4 fimbrial biogenesis protein PilZ.
  
     0.767
celC
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
    0.748
evgS_2
Sensor histidine kinase.
   
 0.634
Lcin_1157
Calcium-transporting ATPase.
  
     0.627
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
  
  
 0.610
bcp
Acetylpolyamine aminohydrolase.
  
     0.608
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.