Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
emrA_3Multidrug efflux system. (366 aa)    
Predicted Functional Partners:
emrB_2
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
 
 0.977
emrB_1
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
 
 0.933
hsrA
Multidrug efflux protein.
 
 0.890
tolC
Outer membrane protein TolC.
 
 0.873
oprM_5
Outer membrane efflux protein.
 
  0.861
emrB_3
Multidrug resistance protein, MFS superfamily.
 
  0.838
mdtP
Outer membrane efflux lipoprotein.
  
  0.606
ttgC_1
Outer membrane efflux protein.
  
  0.605
oprM_4
Outer membrane efflux protein.
  
  0.589
oprM_7
Outer membrane efflux protein.
  
  0.582
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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