STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blaIBlaI/MecI/CopY family transcriptional regulator. (141 aa)    
Predicted Functional Partners:
penA
Cell division protein FtsI/penicillin-binding protein 2.
 
     0.844
bla
class-D beta-lactamase.
    
 0.838
copA_1
Cation transport ATPase.
  
  
 0.821
Lcin_0935
Putative helicase/relaxase.
    
  0.603
ampH
Putative secreted esterase.
  
     0.588
amiB
N-acetylmuramoyl-L-alanine amidase.
    
  0.580
Lcin_2310
Sporulation domain-containing protein.
    
  0.577
Lcin_0402
Hypothetical protein.
  
  
  0.439
mta
Transcription regulators (MerR Family).
     
 0.409
tnpR_2
Transposase.
 
  
  0.407
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.