mta protein (Legionella cincinnatiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

mta

Transcription regulators (MerR Family). (315 aa)

Predicted Functional Partners:

evgS_2

0.823

rpoD

0.713

gmr_3

0.672

rpoB

0.664

cyaA_7

0.600

ycdT

0.595

Lcin_0159

0.574

rpoC

0.574

queF

0.573

rpoA

0.568

Your Current Organism:

Legionella cincinnatiensis

NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lcin_0159	mta	Lcin_0159	Lcin_2539	Hypothetical protein.	Transcription regulators (MerR Family).	0.574
cyaA_7	evgS_2	Lcin_2534	Lcin_0448	Guanylate cyclase.	Sensor histidine kinase.	0.997
cyaA_7	gmr_3	Lcin_2534	Lcin_2586	Guanylate cyclase.	Regulatory protein (GGDEF domain).	0.987
cyaA_7	mta	Lcin_2534	Lcin_2539	Guanylate cyclase.	Transcription regulators (MerR Family).	0.600
cyaA_7	queF	Lcin_2534	Lcin_0612	Guanylate cyclase.	GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).	0.667
cyaA_7	ycdT	Lcin_2534	Lcin_1089	Guanylate cyclase.	Regulatory protein (GGDEF domain).	0.966
evgS_2	cyaA_7	Lcin_0448	Lcin_2534	Sensor histidine kinase.	Guanylate cyclase.	0.997
evgS_2	gmr_3	Lcin_0448	Lcin_2586	Sensor histidine kinase.	Regulatory protein (GGDEF domain).	0.999
evgS_2	mta	Lcin_0448	Lcin_2539	Sensor histidine kinase.	Transcription regulators (MerR Family).	0.823
evgS_2	queF	Lcin_0448	Lcin_0612	Sensor histidine kinase.	GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).	0.887
evgS_2	rpoA	Lcin_0448	Lcin_0617	Sensor histidine kinase.	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.643
evgS_2	rpoB	Lcin_0448	Lcin_1571	Sensor histidine kinase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.746
evgS_2	rpoC	Lcin_0448	Lcin_1570	Sensor histidine kinase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.643
evgS_2	rpoD	Lcin_0448	Lcin_1207	Sensor histidine kinase.	RNA polymerase sigma 70 factor (RpoD); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.758
evgS_2	ycdT	Lcin_0448	Lcin_1089	Sensor histidine kinase.	Regulatory protein (GGDEF domain).	0.978
gmr_3	cyaA_7	Lcin_2586	Lcin_2534	Regulatory protein (GGDEF domain).	Guanylate cyclase.	0.987
gmr_3	evgS_2	Lcin_2586	Lcin_0448	Regulatory protein (GGDEF domain).	Sensor histidine kinase.	0.999
gmr_3	mta	Lcin_2586	Lcin_2539	Regulatory protein (GGDEF domain).	Transcription regulators (MerR Family).	0.672
gmr_3	queF	Lcin_2586	Lcin_0612	Regulatory protein (GGDEF domain).	GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).	0.797
gmr_3	rpoD	Lcin_2586	Lcin_1207	Regulatory protein (GGDEF domain).	RNA polymerase sigma 70 factor (RpoD); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.451