STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_2540GNAT family acetyltransferase. (155 aa)    
Predicted Functional Partners:
traE
Type IV conjugative transfer system protein TraE.
  
     0.607
Lcin_2978
Phosphotransferase enzyme family protein.
  
     0.554
Lcin_1237
Putative aminoglycoside phosphotransferase.
 
     0.529
Lcin_0957
Ankyrin repeat protein.
  
     0.490
Lcin_1174
Hypothetical protein.
   
   0.482
Lcin_1236
GNAT family acetyltransferase.
  
    0.470
acsB
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
  
 
 0.461
acsA
acetyl-CoA synthetase.
  
 
 0.461
Lcin_2549
Phosphotransferase enzyme family protein.
  
    0.434
mdlB
Multidrug ABC transporter ATPase/permease.
  
     0.429
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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