STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_2544Multidrug resistance ABC transporter ATP-binding protein. (604 aa)    
Predicted Functional Partners:
uup_3
ABC transporter ATP-binding protein.
 
 
   0.907
rkpA
Type I polyketide synthase WcbR.
   
 0.802
Lcin_2546
GNAT family acetyltransferase.
 
     0.793
pksM
Polyketide synthase.
 
 
 0.729
grpB
Glutamate rich protein GrpB.
 
     0.702
tycC_2
Non-ribosomal peptide synthase.
  
 
 0.700
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.667
Lcin_2549
Phosphotransferase enzyme family protein.
 
     0.631
niaR
Transcriptional regulator.
       0.625
hlyB
ABC transporter.
 
 
 
0.589
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.