STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_2549Phosphotransferase enzyme family protein. (321 aa)    
Predicted Functional Partners:
Lcin_2548
Aminoglycoside 3-N-acetyltransferase.
 
     0.877
Lcin_2546
GNAT family acetyltransferase.
 
     0.824
Lcin_1920
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
 
  0.805
Lcin_1237
Putative aminoglycoside phosphotransferase.
 
 
   0.789
Lcin_0156
Putative aminoglycoside phosphotransferase.
 
     0.776
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.774
yfcX
Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.774
Lcin_3028
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.770
Lcin_0957
Ankyrin repeat protein.
  
 
  0.769
Lcin_1525
Putative sex pilus assembly and mating pair protein TraG.
  
     0.769
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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