STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
intAPhage-related integrase; Belongs to the 'phage' integrase family. (431 aa)    
Predicted Functional Partners:
AlpA_1
Prophage CP4-57 regulatory protein (AlpA).
 
     0.805
traC_2-2
5' DNA primase TraC.
 
     0.782
Lcin_2711
Inner membrane protein.
 
    0.755
Lcin_2715
Hypothetical protein.
       0.682
AlpA_2
Prophage CP4-57 regulatory protein (AlpA).
  
     0.642
intS_4
Phage related integrase.
  
     0.628
Lcin_1457
Inner membrane protein.
 
    0.602
Lcin_1195
Inner membrane protein.
 
    0.584
Lcin_2731
Inner membrane protein.
 
    0.584
Lcin_2079
Inner membrane protein.
  
     0.580
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.